diff --git a/cmd/gotk/bootstrap_github.go b/cmd/gotk/bootstrap_github.go
index a8de2365..254b3312 100644
--- a/cmd/gotk/bootstrap_github.go
+++ b/cmd/gotk/bootstrap_github.go
@@ -239,12 +239,12 @@ func bootstrapGitHubCmdRun(cmd *cobra.Command, args []string) error {
 			return err
 		}
 		logger.Successf("sync manifests pushed")
+	}
 
-		// apply manifests and waiting for sync
-		logger.Actionf("applying sync manifests")
-		if err := applySyncManifests(ctx, kubeClient, namespace, namespace, ghPath, tmpDir); err != nil {
-			return err
-		}
+	// apply manifests and waiting for sync
+	logger.Actionf("applying sync manifests")
+	if err := applySyncManifests(ctx, kubeClient, namespace, namespace, ghPath, tmpDir); err != nil {
+		return err
 	}
 
 	if withErrors {
diff --git a/cmd/gotk/bootstrap_gitlab.go b/cmd/gotk/bootstrap_gitlab.go
index 00611f56..e51df900 100644
--- a/cmd/gotk/bootstrap_gitlab.go
+++ b/cmd/gotk/bootstrap_gitlab.go
@@ -211,12 +211,12 @@ func bootstrapGitLabCmdRun(cmd *cobra.Command, args []string) error {
 			return err
 		}
 		logger.Successf("sync manifests pushed")
+	}
 
-		// apply manifests and waiting for sync
-		logger.Actionf("applying sync manifests")
-		if err := applySyncManifests(ctx, kubeClient, namespace, namespace, glPath, tmpDir); err != nil {
-			return err
-		}
+	// apply manifests and waiting for sync
+	logger.Actionf("applying sync manifests")
+	if err := applySyncManifests(ctx, kubeClient, namespace, namespace, glPath, tmpDir); err != nil {
+		return err
 	}
 
 	logger.Successf("bootstrap finished")